Fusion event
HBV-TMEFF2 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
AF090842.1;AB033554.1;AB014381.1;M32138.1;AB032431.1;AB036910.1;AB064310;AY090454.1
End
193067980/192203254 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10b/Upstream/3070143; hsa-mir-1244-1/Downstream/14579980;
Nearest cancer related gene
Upstream sequence
ctatttatgtgtctatgtatctatgtatctatctatctatctGCCTACCTACCTATGTCTCTATTggcatatttccgtttattgtgctttgctgccccct
Downstream sequence
tttttttttttttttaacaaattgaaggtatgtgacaaccatgcattcaacaagtctatgggtgatagttttttcaacagcatgtgctcatatcatgtct
Zhao, L. H., et al.Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma. Nat Commun ,2016,7: 12992.