Fusion event
HBV-ELK3 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
AF090842.1;AB033554.1;AB014381.1;M32138.1;AB032431.1;AB036910.1;AB064310;AY090454.1
End
96615543/96221765 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7i/Upstream/911781; hsa-mir-1178/Downstream/1270144;
Nearest cancer related gene
Upstream sequence
ATAGGAGGAGTTGGGACTCGTCAGCTGCCATGCATCCCAGCAAAGTGGGGGCTTGCAAGATTTGTGAGATGCAGAGGTGGTTTTGACCCAGCAGTGAAAT
Downstream sequence
GACTGTCTTACAGACCATTGTGGTTAATACTGATTTCTGTAAAGAATATCCCCTTTAAAGAGCCCTAAATAAAATGCCCTGTGGGTAATTGGAGAGCACT
Zhao, L. H., et al.Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma. Nat Commun ,2016,7: 12992.