Fusion event
HBV-chr3 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
GGCCGACCACGGGGCGCACCTCTCTTTACGCGGTCTCCCCGTCTGTGCCTTCTCATCTGCCGGACCGTGTGCACTTCGCTTCACCTCTGCACGTCGCATG| |GAGACCACCGTGAACGCCCACCAGGTCTTGCCCAAGGTCTTACATAAGAGGACTCTTGGACTCTCAGCAATGTCAACGACCGACCTTGAGGCATACTTCA
End
152744174/153026385 (Hg38)
Nearest miRNA
hsa-let-7g/Upstream/1460390; hsa-mir-1224/Downstream/6256261;
Upstream sequence
tcaaaggtagagagtgttacagatggtgcaaatatcaagaagtgaaattaaagcagttgagttaaatttgtacagtgttatccttgtttgtactaaattc
Downstream sequence
GTTTTAATTGAAAAATACATATTCACAACGTAGCTCTAAAGATAAATTAATTGTGGCTGATATTTGCTCAATCATATCATTTTTCTGTATCGATATTAAT
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).