Fusion event
HBV-chr5 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CTGTGTTGGGGTGAGTTGATGAATCTGGCCACCTGGGTGGGAAGTAATTTGGAAGACCCAGCATCCAGGGAATTAGTAGTCAGCTATGTCAATGTTAATA| |TGGGCCTAAAAATCAGACAACTATTGTGGTTTCACATTTCCTGTCTTACTTTTGGAAGAGAAACTGTTCTTGAGTATTTGGTGTCTTTTGGAGTGTGGAT
End
8082001/8081888 (Hg38)
Nearest miRNA
hsa-mir-4277/Upstream/1253967; hsa-mir-10397/Downstream/379037;
Upstream sequence
ATATATTTTCCTTTCCACTATTTTTCTTTCATCAACATAACCTCAAATCAATATTATTATTTTTCTTCTTTTACCTCACTGCAGACCAGACTTTCCCTTG
Downstream sequence
CCTTTGATGGAAGATGTAAGGAGGTGGGCCTGTGTTGAAGCCCTCCTGAGTATGGCTACTGTTCCTATCGGCCTATGACTAGAGAAGCCCAGGAACTAAC
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).