Fusion event
HBV-chr11 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TTGTTTAAGGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGTTCACCAGCACCATGCA| |ACTTTTTCACCTCTGCCTAATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATTGACCCGTAT
End
124040941/124170234 (Hg38)
Nearest miRNA
hsa-let-7a-2/Upstream/788722; hsa-mir-3167/Downstream/2818224;
Upstream sequence
gaagctgcagaccttcgcggtgagtgttacagctcataaaagcagtgtggacccaaagagtaagcagtagcaagatttattgcaaagagcagaagaacaa
Downstream sequence
agcttccacagtgtggaaggggaccccagcagcttgccactgctggctcaggcagcctggttttattctcttatctggccccacccacatcctgctgatt
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).