Fusion event
HBV-chr12 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TGGAAGAGAAACTGTTCTTGAGTATTTGGTGTCTTTTGGAGTGTGGATTCGCACTCCTCCCGCTTACAGACCACCAAATGCCCCTATCTTATCAACACTT| |CCGGAAACTACTGTTGTTAGACGACGAGGCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGGTCTCAATCGCCGCGTCGCAGAAGATCTC
End
77665075/77271295 (Hg38)
Nearest miRNA
hsa-let-7i/Upstream/7686472; hsa-mir-1178/Downstream/2147962;
Upstream sequence
TATAAAGCCAGTGACAAGGAATTTGAATTTTATTGTGCTTTTATTTTATAAATTAAAGGACATTATTATTTGGATAGTGCTTTGGAAAACATGACTTTAT
Downstream sequence
TTTGAAATGTTTTTTTTTTCTACAAAATGTTGAGTTAGCAGGTTTATGTGGCAATAGAGAAACAGAAAAATAATGCAATGAAGAGCCAGCTATCATTGAA
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).