Fusion event
HBV-SND1 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGTTCACCAGCACCATGCAACTTTTTCACCTCTGCCTAAT| |CATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATTGACCCGTATAAAGAATTTGGAGCTTCTGTG
End
127511112/127871059 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10525/Upstream/812875; hsa-mir-10399/Downstream/210802;
Upstream sequence
TACTACTGTCTTCACCCTTCATTCATCTTTCTGGTCCTTTTCAGTCCCATCTCGCCCTTCTCCCAGGCACCACCCACTTCTCTTTTTATACAAATTGGTT
Downstream sequence
cctacacagtcaggataatccttatcactgtcttccacctctatatcttgtcccactggaaggttttcagggggcaataatgtaaatggagctgtcatct
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).