Fusion event
HBV-chr5 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CATACTTCAAAGACTGTTTGTTTAAGGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTG| |TTCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCA
End
148816994/149437431 (Hg38)
Nearest miRNA
hsa-mir-10397/Upstream/6698; hsa-mir-103a-1/Downstream/295394;
Nearest cancer related gene
Upstream sequence
TTCACTTTAAAGCCTAAGCATTGTATAATATTAAATAAGAGGAGGGGATGGGAGTGAAATGAGAATGGTATGAACAGAGGGAAATGAGAACACACCCAGA
Downstream sequence
TAAACGGGGCAGGGAGGGAAAGCAAATGTATTCCTCTTGTATACTTTTTTATATCTATATAAAGAAACCCAGGAAAAATACAAAAGGACCTAATAAAAGT
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).