Fusion event
HBV-chr13 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TTTAAGGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGTTCACCAGCACCATGCAACT| |TTTTCACCTCTGCCTAATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATTGACCCGTATAAA
End
47940280/47366145 (Hg38)
Nearest miRNA
hsa-mir-2276/Upstream/3169945; hsa-mir-1267/Downstream/2630270;
Upstream sequence
ggttactttgtatccattttgtcaatctgtactttttatttgaatgcttaatcatttatatttaatgtaattattgataaggtagaatttatatggacaa
Downstream sequence
tttctgttTTTAAAAAATATTAATTGGCCAAGATTTAAGTTATGCTTACTGTTTATGGGGTGCTTTGAGGttttttattattatactttaagttctggga
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).