Fusion event
HBV-OPA1 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
AATGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAGGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGA| |GGCTGTAGGCATAAATTGGTCTGTTCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCT
End
193331057/193613268 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7g/Upstream/3783259; hsa-mir-3137/Downstream/1521238;
Upstream sequence
tacaggaaatgtcaaggacagagaacatgttaaatcatactgctggttgcaatcaccaaaatTATTgcagtggctcatgcctataatcccagcactttgg
Downstream sequence
ttgtgctaggttatggtttgtccacaagaacacaaatatagaagtatggagtccttctcaggccatatttagtttgctttaacaATACTTAAAAAAAAAA
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).