Fusion event
HBV-SDCCAG8 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CTCTGCCTAATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATTGACCCGTATAAAGAATTTG| |GAGCTTCTGTGGAGTTACTCTCTTTTTTGCCTTCTGACTTCTTTCCTTCTATTCGAGATCTCCTCGACACCGCCTCTGCTCTGTATCGGGAGGCCTTAGA
End
243556275/243392973 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-1/Upstream/46718; hsa-mir-3124/Downstream/3808994;
Upstream sequence
AAACTGTTAACGGAGAATTAACTTCTTTGGCATGCTTTCATACTTATCTTCCAAATTAAAGAAAATGAAATGGGCAGAAACAGAGTGTAGATTACCTCCT
Downstream sequence
TTTTGTCAAAAATGGTGGGAATTTGAAAATTAATAATAAAAAAGGGAACAGATGCAGTAACATGCCAGAGGGAGATTAATGTGGAGAGTAAAATCTGTGA
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).