Fusion event
HBV-chr1 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TTGGGACTTCAACCCCAACAAGGATCACTGGCCAGAGGCAAATCAGGTAGGAGCGGGAGCATTCGGGCCAGGGTTCACCCCACCACACGGCGGTCTTTTG| |GGGTGGAGCCCTCAGGCTCAGGGCATATTGACAACAGTGCCAGCAGCGCCTCCTCCTGCCTCCACCAATCGGCAGTCAGGAAGACAGCCTACTCCCATCT
End
196118060/196148930 (Hg38)
Nearest miRNA
hsa-mir-101-1/Upstream/3012347; hsa-mir-1182/Downstream/433483;
Upstream sequence
GTTGGCACAATTATCTTTCaaaaataagaaataatataattctatttgtatttttgattgtcatttattattattttttaatttaaCAGAAGAGATATTT
Downstream sequence
CCTTCTCCTCTACCCACAGGGTCAGTTAGCATAACAGTCGCAGAGCAAGCATTCAGGAGAATAACAAGCTCAATAACAAGCTGAAAGAACATTTTCATTA
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).