Fusion event
HBV-chr6 integration
Detection method
PCR and Ultra-deep sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TTTAAGGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGTTCACCAGCACCATGCAACT| |TTTTCACCTCTGCCTAATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATTGACCCGTATAAA
End
155035623/154714489 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/3611713; hsa-mir-1202/Downstream/138871;
Upstream sequence
aggtcaggagattgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattaattagccggacatggtggcgcctgtagtcc
Downstream sequence
tggtatcttcagaaagtaatgaggattaggtaaggtcatcagggtgagggccccatgatgcaactgatggctttataagaagaggaagcaatggccagcc
Tu, T., et al. Hepatitis B Virus DNA Integration Occurs Early in the Viral Life Cycle in an In Vitro Infection Model via Sodium Taurocholate Cotransporting Polypeptide-Dependent Uptake of Enveloped Virus Particles. J Virol ,2018,92(11).