Fusion event
HBV-chr14 integration
Detection method
Alu PCR and sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
Polymerase ,pre-core/core
Integrated sequence
CGCACTCCTCCTGCTTACAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGAAACTACTGTTGTTAGACGACGAGGCAGGTCCCCTAGAAGAAGAA| |CTCCCTCGCCTCGCAGACGAAGGTCTCAATCGCCGCGTCGCAGAAGATCTCAATCTCGGGAATCTCAATGTTAGTATCCCTTGGACTCATAAGGTGGGAA
End
28563409/28094203 (Hg38)
Nearest miRNA
hsa-mir-208a/Upstream/460925; hsa-mir-1185-1/Downstream/2920443;
Nearest cancer related gene
Upstream sequence
tgtatattgatgagccaatagtcatatcatataaattagggtatatttctaacactgggaatgtgtcttccaactcaattcttaaagtttataattttgg
Downstream sequence
ctcttctctagtttttgaatttccatgtaagtgtaaattatcttctgaatattcacaagtaaatgctggtagaatattttatctggattgcattgaatat
Yan, H., et al. Characterization of the genotype and integration patterns of hepatitis B virus in early- and late-onset hepatocellular carcinoma. Hepatology ,2015,61(6): 1821-1831.