Fusion event
HBV-ROS1 integration
Detection method
PCR and Sanger sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
Not given
End
117647569/117326406 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10398/Upstream/10542186; hsa-mir-1202/Downstream/1742641;
Nearest cancer related gene
Upstream sequence
ataactcaagcacaccctgagaatgaccctgtgtgcgtttcacattctgagctaaggaatctgggagtggcgaacccggagattcactccttatctatga
Downstream sequence
TGCTCTTTCTGCAAAAAATAATAAATACAGAAAATATACATGACAATATACCTGTTATTTCTAGTTGTTCATAGATCTTCTTAGTGACTGAACGCCAGAG
Kawai-Kitahata, F., et al. Comprehensive analyses of mutations and hepatitis B virus integration in hepatocellular carcinoma with clinicopathological features. J Gastroenterol ,2016,51(5): 473-486.