Fusion event
HBV-LOC105377732 integration
Detection method
PCR and Sanger sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Reference genome
Not given
End
172942977/173515974 (Hg38)
Nearest miRNA
hsa-mir-10397/Upstream/168438; hsa-mir-1229/Downstream/1235760;
Upstream sequence
gccggcgcaggcgcagagaggcgcgccgcgccggcgcaggcgcagagaggcgcgccgcgccggcgcaggcgcagagaggcgcgccgcgccggcgcaggcg
Downstream sequence
ttcatttaatactcaaccagtctttattaagggcttcctctgtgccagcaactgttctaggcacccaggatccaggcttgaaaaagacaaagggtctgct
Kawai-Kitahata, F., et al. Comprehensive analyses of mutations and hepatitis B virus integration in hepatocellular carcinoma with clinicopathological features. J Gastroenterol ,2016,51(5): 473-486.