Fusion event
HBV-LOC101929210 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
S protein|Polymerase|large S protein|middle S protein|
Integrated sequence
TGCCGGACCTGCATGACTACTGCTCAAGGAACCTCTATGTATCCCTCCTGTTGCTGTACCAAACCTTCGGACGGAAATTGCACCTGTATTCCCATCCCAT| |CATCCTGGGCTTTCGGAAAATTCCTATGGGAGTGGGCCTCAGCCCGTTTCTCCTGGCTCAGTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTC
End
95039765/94118614 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/6818031; hsa-mir-1243/Downstream/4878773;
Upstream sequence
caagatggattaaagatttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacataggcgtgggcaaggactt
Downstream sequence
ccttgcttttgtatgctgtattatacagcttctcCATATGTACATAATTGGATAGTCATCACCTGTGGATTTTTTATATACTACTATCCAAATATTTTCC
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.