Fusion event
HBV-LINGO2 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
ATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGATCTTCTAGATACCGCCTCAGCTCTGTATCG| |GGAAGCCTTAGAGTCTCCTGAGCATTGTTCACCTCACCATACTGCACTCAGGCAAGCAATTCTTTGCTGGGGGGAACTAATGACTCTAGCTACCTGGGTG
End
28112973/28112975 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-2/Upstream/6600790; hsa-let-7a-1/Downstream/750651;
Upstream sequence
gctggtctcgaactcttgacctcaggtggtccacccacctcaacctccctaagtgctgagattaTTTTAATCTTTGACAAGCCTCCACCTATTTGAGGTA
Downstream sequence
gtccttgcccacgcctatgtcctgaatggtaatgcctaggttttcttctagggtttttatggttttaggtctaacgtttaaatctttaatccatcttgaa
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.