Fusion event
HBV-LOC105373277 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
AAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTT| |TCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAA
End
248687705/248524404 (Hg38)
Nearest miRNA
hsa-mir-101-1/Upstream/1322344; hsa-mir-3124/Downstream/301973;
Upstream sequence
TTTAACAAAAACGAGGGAAAAGAAGCCTGGTTAAATTTGTCTTCTAGGATATTCTTATGTGATTTTCCTCCTCCAGTAATGGAGAGGAGAGTTGGGAACT
Downstream sequence
GAGCAGAACATGCTGAGGAGCACATGTTTTTATTTACAATATGCAAGTAGAGAAGTAGTTCTACAGGAAGCGTCACATGTACAAATGCATTATTCCTGAT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.