Fusion event
HBV-chr4 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
AAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTT| |CACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAAT
End
178985999/178064845 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/3640981; hsa-mir-1305/Downstream/4104448;
Upstream sequence
TATGTTGCACTGGATTTCCGTTCAGCTGTGAGGTAGGGACCACACTCCATCTCTAGGCTGTGAGGTAGGGATGGAGGAATACATGAACCAGCCCCCCCCA
Downstream sequence
CTTTTTCTTACATTTTAAAGGTAATACTCATGGGCTTTCTTATATCATCCTTGCTTCACCAATACCTAGAATATTTTCTGCTATTTAGTATTAATATAAT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.