Fusion event
HBV-chrX integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|
Integrated sequence
AGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTA| |ATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTACTG
End
4797987/4879946 (Hg38)
Nearest miRNA
hsa-mir-3690-1/Upstream/2270692; hsa-let-7f-2/Downstream/1503960;
Upstream sequence
TTGGTTATACTCTGTCTTGCATTAGGCTTTCTTTCCAGACCCAGAGCTCCAGGAGTCTATGATTCTTATATTCCTATCATATTAGACAGTATTTTTGGCC
Downstream sequence
ACGGAAAGTAAGTAATTTCATTTAATCCAATTAGATTTTGTAGGTTTTATCATTTTTTCTCAAATCTTAGATCTGGAAAGAAATAAATGCTTTAAGAAAT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.