Fusion event
HBV-chr10 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
GGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCC| |TAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTAC
End
88512743/86752986 (Hg38)
Nearest miRNA
hsa-mir-1265/Upstream/488198; hsa-mir-107/Downstream/750895;
Nearest cancer related gene
Upstream sequence
TCCTGCCTCAAGGCCTAGGAAAGATCAGGTTCTATGGTAAAGGGTGTACGGATAGTAGGGAAAGGAGGAATACAGAGGCCACGGACTAGGTAGGACCAAG
Downstream sequence
TGAGAGCAGCAATATCCTCCATCATCTATCTTTCAATCATAGTAGCCAGTGCTTTGAGGCAAAGATAAATTAAAATGGAGCTAAGGGAGAAGGAGCAAGT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.