Fusion event
HBV-KCNT2 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
GGACTCTCAGCAATGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCT| |TTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAA
End
196414208/196445078 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-1/Upstream/3308495; hsa-mir-1182/Downstream/137335;
Upstream sequence
CAGTCTAAAAGGATTTTCTAAGTTGTGAGCCCTTTATTCTCTACAACCTACTTTTCTTTTTGCTTAAATTTATTTTACTTATCTCATTCAGCCCTTAAAA
Downstream sequence
GTAAAGTGTATATCCAAGAAATAATATAGAAATATTAGCTTACACACTATTTCCATTATATGTTTAAAGATATGTTCACAGATTTGATAAAAATAAAATA
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.