Fusion event
HBV-BTBD7 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
TTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCA| |ACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTAT
End
93718618/93252272 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1260a/Upstream/15985982; hsa-mir-1185-1/Downstream/695954;
Upstream sequence
ggtggcgggtgcctatcatcccagctactcaggaggctgaggcacgagaactgcttgaactcgggaggagaaggttgtagtaagctgagatctcactgcg
Downstream sequence
gcactccagcctggatgacaagagtgaaactccgtcttaaaaaaaaaaaaaaGATTGATAATCAATTCAAGAGACTTAGAAATAAACCAAATTTTCTTTT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.