Fusion event
HBV-chr3 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
S protein|Polymerase|large S protein|middle S protein|
Integrated sequence
AATACCGCAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAACTACCGTGTGTCTTGGCCAAAATTCGCAGTCCCCAACCTCCAATCAC| |TCACCAACCTCTTGTCCTCCAACTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCGTTTTATCATCTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCT
End
63704112/63718436 (Hg38)
Nearest miRNA
hsa-let-7g/Upstream/3100566; hsa-mir-12124/Downstream/3507028;
Upstream sequence
agggttgatggttaaagcaaaaattataatactaactgatacagtttaaatatatgtacagaaaatatttaagtctattaaattataagcagagagaata
Downstream sequence
TACTTCATTTCAACTTGTTTATTTGATTTGTTTATTGTAACTCTTCTATTTAGATGAAATGGACCTTGCTAATATTCTTTATCCTTACATTTACCTATGT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.