Fusion event
HBV-chr8 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|
Integrated sequence
TAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCC| |AAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTC
End
41342034/41484515 (Hg38)
Nearest miRNA
hsa-mir-124-1/Upstream/213372; hsa-mir-10400/Downstream/175926;
Nearest cancer related gene
Upstream sequence
TAGTCCAAGTAATTATATGTAACGTAAAATTACATACAGCACAGTCATCAAAGAAGCTGTCCTTCCTTCCCCTATCACTAAGATCTAGGGTGACTCTGGA
Downstream sequence
gattacaggggcatgccactacctcgggctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggctggtctccgactcctgacttcg
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.