Fusion event
HBV-chr4 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
CTTCAGTACGAGATCTTCTAGATACCGCCTCAGCTCTGTATCGGGAAGCCTTAGAGTCTCCTGAGCATTGTTCACCTCACCATACTGCACTCAGGCAAGC| |AATTCTTTGCTGGGGGGAACTAATGACTCTAGCTACCTGGGTGGGTGTTAATTTGGAAGATCCAGCGTCTAGAGACCTAGTAGTCAGTTATGTCAACACT
End
67590201/66724483 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/447555; hsa-mir-1243/Downstream/9849085;
Upstream sequence
attccattccattccattccattccgttccattccattcgtgttgatgccattccaatccataccattccattccattccattccattccattccgttcc
Downstream sequence
ATGAATGTCTGTCAAAAGGCTCAGGTGAAATCTGTCTACTCCTGGTTGACCAAATTGATCCAGCTGCAGTAAATGATGAAACAGATCATTCATCTAAGGT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.