Fusion event
HBV-chr11 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
Polymerase|large S protein|
Integrated sequence
AACACATAGCGCCTCATTTTGTGGGTCACCATATTCTTGGGAACAAGATCTACAGCATGGGGCAGAATCTTTCCACCAGCAATCCTCTGGGATTCTTTCC| |CGACCACCAGTTGGATCCAGCCTTCAGAGCAAACACCGCAAATCCAGATTGGGACTTCAATCCCAACAAGGACACCTGGCCAGACGCCAACAAGGTAGGA
End
51590967/54528311 (Hg38)
Nearest miRNA
hsa-mir-129-2/Upstream/6431453; hsa-let-7a-2/Downstream/2215562;
Upstream sequence
tgaacacaaacatcacaaagtagtttctgagaatgcttctgtttagtttttatgtgaagatgaacccgtttccaacgaaatcttcaaagaggtccacata
Downstream sequence
tccacttgcagattccaaagaaagggagtttcaaaactgctccgtcaacaggattgttcaactctgtgagttgaatgcagtcctcacaggaaacattctg
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.