Fusion event
HBV-LOC105373150 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
TGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGG| |CATGGACATCGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGATCTTCTAGATACC
End
27345375/27327258 (Hg38)
Nearest miRNA
hsa-mir-23c/Upstream/7310071; hsa-let-7f-2/Downstream/1168297;
Upstream sequence
ggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggttagggtt
Downstream sequence
tgtccataaaaaaacttgtacaagaatgtgcatagcaTGGGAAAATGAGGAATGTTGAGGCAGGATCAGTAGACAGGAGATACATATATgcacaagaaaa
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.