Fusion event
HBV-chr4 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
CTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTA| |CTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGATCTTCTAGATACCGCCTCAGCTCTGTATCGGGAAGCCTTAGAGTCTCC
End
103027989/102106832 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/776418; hsa-mir-1243/Downstream/7381866;
Upstream sequence
ATCAGAGGCAGCAGTTTTCTTAATGGGGGAAGAATACAAGAGTATAGTTTTCCTTCTGTGCAGTAATTTCTCCATCAAGTTCTTTTATACAGTGGCAATT
Downstream sequence
caaaaaaaaaaaaaaaaaaaattacacaatgagagggagaagaaaagaaaaaactaggaaaaggaatgaagattgcctataagatacagacaactataaa
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.