Fusion event
HBV-SPOCK1 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
Polymerase|large S protein|
Integrated sequence
GGCCAGACGCCAACAAGGTAGGAGCTGGAGCATTCGGGCTGGGTTTCACCCCACCGCACGGAGGCCTTTTGGGGTGGAGCCCTCAGGCTCAGGGCATACT| |ACAAACTTTGCCAGCAAATCCGCCTCCTGCCTCCACCAATCGCCAGTCAGGAAGGCAGCCTACCCCGCTGTCTCCACCTTTGAGAAACACTCATCCTCAG
End
136444304/137108615 (Hg38)
Nearest miRNA
hsa-mir-10397/Upstream/1305540; hsa-mir-103a-1/Downstream/538957;
Upstream sequence
gtgtccccatccaaatctcatcttgacttttactcccataattcccacatattgtgggagggacctcataggagatcattgaatcatggggggtggcttc
Downstream sequence
GAAGAATATTACAACCTTTGGTAAGATGGCTTTAGACATCTTCTTCTGCCCCAGGAAAAGGGTTAAGCAGGTCTGGGAAACTGAGAAGCTGGTCAGGCTG
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.