Fusion event
HBV-chr6 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
Polymerase|large S protein|middle S protein|
Integrated sequence
AATTCCACAACCTTCCACCAAACTCTGCAAGATCCCAGAGTGAGAGGCCTGTATTTCCCTGCTGGTGGCTCCAGTTCA| |GGAACAGTAAACCCTGTTCTGACTACTGCCTCTCCCTTATCGTCAATCTTCTCGAGGATTGGGGACCCTGCGCTGAACATGGAGAACATCACATCAGGAT
End
86091086/85381368 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/6842059; hsa-mir-1202/Downstream/4931374;
Upstream sequence
agaagaaatagataacctgaatagccatatagctattaaagaaatcagaattatcaatacaaatcgtcccacaaagaaaactGGATTTTATCATCAATAT
Downstream sequence
aaaaatacaaaaaattagccgggcgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagc
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.