Fusion event
HBV-LRRC4C integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
Polymerase|large S protein|
Integrated sequence
TCTGGGATTCTTTCCCGACCACCAGTTGGATCCAGCCTTCAGAGCAAACACCGCAAATCCAGATTGGGACTTCAATCCCAACAAGGACACCTGGCCAGAC| |GCCAACAAGGTAGGAGCTGGAGCATTCGGGCTGGGTTTCACCCCACCGCACGGAGGCCTTTTGGGGTGGAGCCCTCAGGCTCAGGGCATACTACAAACTT
End
40478764/40457214 (Hg38)
Nearest miRNA
hsa-mir-1343/Upstream/4447010; hsa-let-7a-2/Downstream/3102442;
Upstream sequence
agaaaaaaaaaaCAGTTACTTGAGGATATACCTCAGCAATTTTTTTTAAAAAAAAGAATCTCAAAGAACACAATCAAACAAATCACATGTTGATTGATAT
Downstream sequence
GAAGTAGAGAACaattataaaaaaatttaaaaattaCAGAAAGGCAGAAAGATATTTTTAAGAAGAAAGTATACCCATCAAAGAGTAATAAATTCATACC
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.