Fusion event
HBV-chr6 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
ACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGG| |ACATCGACCCTTATAAAGAATTTGGAGCTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGATCTTCTAGATACCGCCTC
End
106806766/106358891 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/7234195; hsa-mir-1202/Downstream/425234;
Upstream sequence
taatGTTTAATGTAATTACCTTATAATCATATTTACTATTATAAACTAGTCTAGTATAAAAATCATGTAATCaaaatattaaaatatttttaaGAACCAC
Downstream sequence
gctgctcaggaggctgaggtgggacgatcacttgtgctcaggtggtcaaggctgcagtgagtgcagtgagaggtgatggtaacagtgtactcctacctga
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.