Fusion event
HBV-SETDB1 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
CTCAGCAATGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTA| |CTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTC
End
150924716/150952240 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-1/Upstream/400226; hsa-mir-1182/Downstream/593556;
Nearest cancer related gene
Upstream sequence
tctgccttaaaaaaaaaaaaagaaaagttagaatcaaattcatggtgctcttacaggattttaagctgccaagtgatgtgacctgcctttttcagattac
Downstream sequence
tctggcttctttgtagatcataggtcttaggatggcaaaagtagattttggaagaccaattaggagatcgttataggagtacagcagagagagacattgt
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.