Fusion event
HBV-C8A integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
TTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGC| |AACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTA
End
57360804/56895131 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12136/Upstream/1669408; hsa-mir-101-1/Downstream/2838096;
Upstream sequence
aggaattatattgttattttccccagttttatagaaagaaagttgaaatccaaagaggttaagtaaatggctcagtgtgactcacttagtattgaaccta
Downstream sequence
ggtcttctgatttagattttgtatatcttccaagtactcatccctttttccaTACATTCTGTCATTCATTCTGATACTATATGTGAGAGGCTTAGACTTT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.