Fusion event
HBV-LRP1B integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
S protein|Polymerase|large S protein|middle S protein|
Integrated sequence
CGGCGTTTTATCATCTTCCTCTTCATCCTGCTGCTATGCCTCATCTTCTTGTTGGTTCTTCTGGACTATCAAGGTATGTTGCCCGTTTGTCCTCTAATTC| |CAGGATCCTCAACAACCAGCACGGGACCATGCCGGACCTGCATGACTACTGCTCAAGGAACCTCTATGTATCCCTCCTGTTGCTGTACCAAACCTTCGGA
End
141290123/140532554 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-128-1/Upstream/4867076; hsa-mir-10b/Downstream/54072;
Nearest cancer related gene
Upstream sequence
gatgtgatctcaactcactgcaaccttcacctctcgggttcaagcgattctcctgcctcagcatcccgagtagctgggactacaggcgagtgcaaccacg
Downstream sequence
cctggctaatttttgtatttttagtcgagatggggtttcaccatgttgaccaggatggtctcaatctcttgaccttgtgatatgcccacctcagcctccc
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.