Fusion event
HBV-FN1 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|Polymerase|
Integrated sequence
TAGGCTGTGCTGCCAACTGGATCCTGCGCGGGACGTCCTTTGTTTACGTCCCGTCGGCGCTGAATCCTGCGGACGACCCTTCTCGGGGTCGCTTGGGACT| |CTCTCGTCCCCTTCTCCGTCTGCCGTTCCGACCGACCACGGGGCGCACCTCTCTTTACGCGGACTCCCCGTCTGTGCCTTCTCATCTGCCGGACCGTGTG
End
216242416/215377693 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10b/Upstream/1619534; hsa-mir-1244-1/Downstream/2522820;
Upstream sequence
tgcttcctgtaaagcctgctggcctgtgggccaattaagcctcttttctttagaaattacccagtctccggtatttctttatagtaatgcaagaatggcc
Downstream sequence
taataTGCATTGTTAAGATATAGCAGAAGCCAGTGGGGTCTCCCCAAGCTTAGCTCTATGAAAACAAATTCTAACAAGTAGAGCATAAACTAGATGTCAG
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.