Fusion event
HBV-LINC00578 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
TGTGGTTTCACATTTCTTGTCTCACTTTTGGAAGAGAAACAGTTATAGAGTATTTGGTGTCTTTCGGAGTGTGGATTCGCACTCCTCCAGCTTATAGACC| |ACCAAATGCCCCTATCCTATCAACACTTCCGGAGACTACTGTTGTTAGACGACGAGGCAGGTCCCCTAGAAGAAGAACTCCCTCGCCTCGCAGACGAAGG
End
177343985/177626197 (Hg38)
Location type
ncRNA_intronic
Nearest miRNA
hsa-let-7g/Upstream/1111046; hsa-mir-1224/Downstream/6260603;
Upstream sequence
gctacttccactcaacattgtttatgagatccatctgggttgctgcattagcagtagttaattcttttctatcactgtacgatatttctattgacagaac
Downstream sequence
agagattttaaagtaagaattggctcacatgattgtgggtgctggcaagtctgaaatttacagggaaagccagcaggctggagacacagggaggagttga
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.