Fusion event
HBV-chr11 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
TGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGG| |CTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGT
End
38116055/38094505 (Hg38)
Nearest miRNA
hsa-mir-1343/Upstream/2084301; hsa-let-7a-2/Downstream/5465151;
Upstream sequence
TATTATTAAAAATAGTATATGTaggcagaagaatggcgtgaacccaggaggcagagcttgcagtgagccaagatggtaccactgcactccagcctgggcg
Downstream sequence
acagagcgagactctgtctcaaaaaaaaaacaaaacaaaaaacaaaaaaCTATATGTAATATTAGCTTGTATAAAATAATCAGAAAACAAGACAAATATC
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.