Fusion event
HBV-LINC01934 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
TTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGC| |AACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTA
End
182000597/181135870 (Hg38)
Nearest miRNA
hsa-mir-10b/Upstream/1274962; hsa-mir-1244-1/Downstream/169723;
Upstream sequence
tcatacctcaaaatgataaagacatatttgatgaactcacagttaatatcatactgaacagataaaaattaaaagttgttctactaacatctggaacaag
Downstream sequence
aaaaggatgacttcttttaccacttttattcaacatagttctagaagtcctcgacagagcagttaggcaaggtaaagaaataaatggtatctgaatagga
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.