Fusion event
HBV-RPL34-AS1 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Integrated sequence
GAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGG| |TCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGG
End
109480641/108559485 (Hg38)
Location type
ncRNA_intronic
Nearest miRNA
hsa-mir-12113/Upstream/7229071; hsa-mir-1243/Downstream/929213;
Upstream sequence
ctgcactccagcctgagcaaggggagcgagactccatcttaaaaaaaaagaaagaaaaatacgggttttccatttaagaaatgagatagtgttccacttt
Downstream sequence
ATGTACTAGTATTGCAGATTAGGAAAAAAAAAAAAACCCAGCTCATCTCAAACCCTCGTGGGTCTTTTTGTGTGACATAGAATGAGAGCTGAGCTGAGCC
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.