Fusion event
HBV-chr5 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
GAATTTGGAGCTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGATCTTCTAGATACCGCCTCAGCTCTGTATCGGGAAG| |CCTTAGAGTCTCCTGAGCATTGTTCACCTCACCATACTGCACTCAGGCAAGCAATTCTTTGCTGGGGGGAACTAATGACTCTAGCTACCTGGGTGGGTGT
End
172192806/172765803 (Hg38)
Nearest miRNA
hsa-mir-10397/Upstream/103540; hsa-mir-10523/Downstream/149280;
Nearest cancer related gene
Upstream sequence
ccctgcagcagctctctgttatatcctcagagcctctcaacagtgcttttggtaaataagtgctcaagaaatattcattgagtaaaGAACTAAGTTAGAA
Downstream sequence
gagatgggaagaacagtactcagatccagtgcaaattggtcattttacggggtgggaaaactgagccagaAGAACTGCCAGAAGCCATTAGGACAGAGAC
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.