Fusion event
HBV-LINC02646 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
AGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTC| |ACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATT
End
132098534/130300270 (Hg38)
Nearest miRNA
hsa-mir-107/Upstream/456896; hsa-mir-202/Downstream/662318;
Upstream sequence
CCTCTCCTTTCTGAAAGTTGGCCTAAACCTTCCAAAAGCACCAGTTGTTAATAGCTATTGAATGAGCTATTATCAATCAAATACCGTGCATTCTAGGGAG
Downstream sequence
TAGGATCAATAACTGCTTGGGTCATGCAAAACTAGGATCTATGCCTTTCTGTGATTCTGCTCTGAAGCTCCAGTGAGAAGGTTCAGGCCAGAAGGGTGCT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.