Fusion event
HBV-PITPNM2 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
Polymerase|large S protein|middle S protein|
Integrated sequence
GTGAGAGGCCTGTATTTCCCTGCTGGTGGCTCCAGTTCAGGAACAGTAAACCCTGTTCTGACTACTGCCTCTCCCTTATCGTCAATCTTCTCGAGGATTG| |GGGACCCTGCGCTGAACATGGAGAACATCACATCAGGATTCCTAGGACCCCTTCTCGTGTTACAGGCGGGGTTTTTCTTGTTGACAAGAATCCTCACAAT
End
123553941/123069394 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7i/Upstream/58666; hsa-mir-3612/Downstream/295370;
Upstream sequence
agacctgctaaatcagaacctctgtgtgagaggcctcagaacctgcgttttaaACACATCTCCTGAGGTTATCAGGAAGCCCTCCAGAGAATGAAACACG
Downstream sequence
GGGCCTGGTACAATCTCCCCTGCAGACAGATGGAGAGACTGGAGACAGGACAGGGATTGCTGCAGGCCACGCAGCAAAGAAAAGGCCAGAGTCCACACCT
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.