Fusion event
HBV-LOC105371256 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
TTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTT| |TTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAG
End
51399770/51365859 (Hg38)
Nearest miRNA
hsa-mir-1225/Upstream/623482; hsa-mir-11401/Downstream/4879661;
Upstream sequence
atttcctatattcccatctagaagttatgctccatgagaagggTCAGTATGTTGTGCAATTCCAAGGACACTAATCACAAAGAACACAATGCAATTGCTG
Downstream sequence
CCTCCTGCATTGTATAATCTGGTAATCTTGtctgtaagagcagtgacctcctctgtactgttcacctccatggccccgtgcctagaatggtacatggcac
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.