Fusion event
HBV-chr17 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
S protein|Polymerase|large S protein|middle S protein|
Integrated sequence
CGGAAATTGCACCTGTATTCCCATCCCATCATCCTGGGCTTTCGGAAAATTCCTATGGGAGTGGGCCTCAGCCCGTTTCTCCTGGCTCAGTTTACTAGTG| |CCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTTTGGCTTTCAGTTATATGGATGATGTGGTATTGGGGGCCAAGTCTGTACAGCATCTTGAGTC
End
22257025/22757698 (Hg38)
Nearest miRNA
hsa-mir-1180/Upstream/3413124; hsa-mir-10226/Downstream/4536212;
Upstream sequence
aagccttctcagaaacttctctgggatgattgcattcaactcaaagcgttgaaccctcctgtggatagagcagttttgaatctctctttttgtggaatct
Downstream sequence
gcaagtggatatgtggtcctctttgaagttgtctttggaaacgggaatatcttcacataaaaactaaacagaagcattctcagaaacttctctgtgatgt
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.