Fusion event
HBV-chr10 integration
Detection method
PCR and Sanger sequencing
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
X protein|precore/core protein|
Integrated sequence
GGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCC| |TAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTAC
End
88512738/86752981 (Hg38)
Nearest miRNA
hsa-mir-1265/Upstream/488193; hsa-mir-107/Downstream/750900;
Nearest cancer related gene
Upstream sequence
ATTCTTCCTGCCTCAAGGCCTAGGAAAGATCAGGTTCTATGGTAAAGGGTGTACGGATAGTAGGGAAAGGAGGAATACAGAGGCCACGGACTAGGTAGGA
Downstream sequence
CCAAGTGAGAGCAGCAATATCCTCCATCATCTATCTTTCAATCATAGTAGCCAGTGCTTTGAGGCAAAGATAAATTAAAATGGAGCTAAGGGAGAAGGAG
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.