Fusion event
HBV-chr15 integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|Core and e antigen|
Integrated sequence
TGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAG| |CTACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCAGTACGAGATCTTCTAGATACCGCCTCAGCTCTGTATCGGGAAGCCTTAGAGTC
End
43416057/43123859 (Hg38)
Nearest miRNA
hsa-mir-1233-1/Upstream/924193; hsa-mir-10393/Downstream/669800;
Upstream sequence
AGCTTCCTGTTACTCTTTCATTTGCAAAGGTGATCATTCTTAGCCTTTTATTCATCTTGCTCATTGACTAGAGTTCCCAGATTATCTCGAATGGGACTGG
Downstream sequence
TATATCCCTTGTGTAGAAACGTTGCCTTCCttttttttttttttttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcgtgatctcag
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.