Fusion event
HBV-PCLO integration
Disease
Hepatocellular carcinoma (HCC)
Quality evaluation
Normal
Region type
precore/core protein|
Integrated sequence
TTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAAT| |CATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCGACCCTTATAAAGAATTTGGAGCTACTGTG
End
82559836/82930520 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10525/Upstream/7015251; hsa-mir-10399/Downstream/9273495;
Upstream sequence
CAGAGGGAGGAAAGTGAGTTTGTGTTAAATCATATACTTTATGGATGTGTCTGTGCTTGCTACTCCAGGCAGGAGGTAAATGAATAAACAGAATAACAAT
Downstream sequence
ATTATCCAAGAGGTAAATGTTAGCATAACACAAAAATACTCAATTCATTTCTACAAAAGTAGAAACTAATGTTCAAAGAGGTTATAATAGAATGCATGAA
Yang, L., et al. Molecular Characterization of HBV DNA Integration in Patients with Hepatitis and Hepatocellular Carcinoma. J Cancer ,2018,9(18): 3225-3235.